Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.71□□□□□ -1.49
Col6a6Q8C6K9 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm23276-201ENSMUST00000157913 138 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm4617-201ENSMUST00000178993 331 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm37235-201ENSMUST00000195171 59 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm5990-201ENSMUST00000203126 746 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm9237-201ENSMUST00000221499 548 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm13451-201ENSMUST00000117649 592 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm12229-201ENSMUST00000120487 468 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm14796-201ENSMUST00000121216 959 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm26357-201ENSMUST00000158218 115 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm23050-201ENSMUST00000158775 165 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm22529-201ENSMUST00000158817 123 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm26057-201ENSMUST00000178099 165 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Mir6903-201ENSMUST00000183597 88 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.71□□□□□ -1.5
Col6a6Q8C6K9 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm4962-201ENSMUST00000199640 2977 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm43398-201ENSMUST00000196584 2742 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm15016-201ENSMUST00000117300 720 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm14512-201ENSMUST00000117924 230 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm13222-201ENSMUST00000119638 138 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm14300-201ENSMUST00000120800 946 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm24719-201ENSMUST00000157520 110 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Mir1970-201ENSMUST00000157839 104 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm29357-201ENSMUST00000186877 698 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm37457-201ENSMUST00000193639 2433 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a6Q8C6K9 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms