Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm24403-201ENSMUST00000104616 130 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Mir3085-201ENSMUST00000175493 89 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm37421-201ENSMUST00000193088 132 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm3216-201ENSMUST00000166927 486 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm3141-201ENSMUST00000168726 499 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Nsa2-203ENSMUST00000225410 974 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 AC165260.6-204ENSMUST00000225571 3508 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm26130-201ENSMUST00000083171 138 ntBASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a3E9PWQ3 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Gm37663-201ENSMUST00000191887 2299 ntBASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Col6a3E9PWQ3 Gm11910-201ENSMUST00000121624 432 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm37920-201ENSMUST00000192952 749 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm17951-201ENSMUST00000198536 496 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm44705-201ENSMUST00000206719 339 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm19031-201ENSMUST00000176280 1365 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm15428-201ENSMUST00000121352 333 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm17907-201ENSMUST00000173150 710 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm14380-201ENSMUST00000122298 431 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm5735-201ENSMUST00000207053 167 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Gm23626-201ENSMUST00000082458 133 ntBASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a3E9PWQ3 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms