Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.46■□□□□ 0.55
Msh5Q9QUM7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Msh5Q9QUM7 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.46■□□□□ 0.54
Msh5Q9QUM7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.45■□□□□ 0.54
Msh5Q9QUM7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Msh5Q9QUM7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Gm13534-201ENSMUST00000121169 513 ntBASIC18.43■□□□□ 0.54
Msh5Q9QUM7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Msh5Q9QUM7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.42■□□□□ 0.54
Msh5Q9QUM7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Fst-202ENSMUST00000223640 2612 ntBASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Msh5Q9QUM7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.41■□□□□ 0.54
Msh5Q9QUM7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Msh5Q9QUM7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Gm10849-201ENSMUST00000100397 618 ntBASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Msh5Q9QUM7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Msh5Q9QUM7 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.39■□□□□ 0.54
Msh5Q9QUM7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms