Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Grk6-206ENSMUST00000224995 2971 ntBASIC15.87■□□□□ 0.13
Scrt1Q99M85 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.87■□□□□ 0.13
Scrt1Q99M85 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scrt1Q99M85 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.86■□□□□ 0.13
Scrt1Q99M85 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Gm21362-201ENSMUST00000194272 928 ntBASIC15.86■□□□□ 0.13
Scrt1Q99M85 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.86■□□□□ 0.13
Scrt1Q99M85 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.86■□□□□ 0.13
Scrt1Q99M85 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scrt1Q99M85 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.86■□□□□ 0.13
Scrt1Q99M85 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scrt1Q99M85 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.84■□□□□ 0.13
Scrt1Q99M85 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scrt1Q99M85 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scrt1Q99M85 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.84■□□□□ 0.13
Scrt1Q99M85 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Scrt1Q99M85 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scrt1Q99M85 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scrt1Q99M85 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Scrt1Q99M85 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scrt1Q99M85 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scrt1Q99M85 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.83■□□□□ 0.12
Scrt1Q99M85 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scrt1Q99M85 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Scrt1Q99M85 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms