Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.27■□□□□ 0.84
Cacnb1Q8R3Z5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cacnb1Q8R3Z5 Gm12933-201ENSMUST00000120203 872 ntBASIC20.27■□□□□ 0.84
Cacnb1Q8R3Z5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cacnb1Q8R3Z5 Gm42474-201ENSMUST00000201073 505 ntBASIC20.27■□□□□ 0.84
Cacnb1Q8R3Z5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cacnb1Q8R3Z5 AC163664.1-201ENSMUST00000226251 1248 ntBASIC20.27■□□□□ 0.84
Cacnb1Q8R3Z5 Gm10602-201ENSMUST00000098239 609 ntBASIC20.27■□□□□ 0.84
Cacnb1Q8R3Z5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Cacnb1Q8R3Z5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cacnb1Q8R3Z5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacnb1Q8R3Z5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cacnb1Q8R3Z5 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacnb1Q8R3Z5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Gm43066-201ENSMUST00000199589 1260 ntBASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cacnb1Q8R3Z5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacnb1Q8R3Z5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cacnb1Q8R3Z5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacnb1Q8R3Z5 Gm11858-201ENSMUST00000117935 838 ntBASIC20.21■□□□□ 0.83
Cacnb1Q8R3Z5 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC20.21■□□□□ 0.83
Cacnb1Q8R3Z5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacnb1Q8R3Z5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.21■□□□□ 0.83
Cacnb1Q8R3Z5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacnb1Q8R3Z5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cacnb1Q8R3Z5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 AC102542.1-201ENSMUST00000225204 1138 ntBASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.2■□□□□ 0.82
Cacnb1Q8R3Z5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Gm5408-201ENSMUST00000197998 747 ntBASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Gm43811-201ENSMUST00000202862 695 ntBASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 AC173345.3-201ENSMUST00000221245 1093 ntBASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cacnb1Q8R3Z5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms