Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf4Q8K4J2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf4Q8K4J2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.54■□□□□ 0.24
Ebf4Q8K4J2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Ebf4Q8K4J2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf4Q8K4J2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf4Q8K4J2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf4Q8K4J2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf4Q8K4J2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Tgds-204ENSMUST00000228543 1594 ntBASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf4Q8K4J2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf4Q8K4J2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf4Q8K4J2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf4Q8K4J2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf4Q8K4J2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.52■□□□□ 0.23
Ebf4Q8K4J2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ebf4Q8K4J2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Gm15546-201ENSMUST00000122095 826 ntBASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ebf4Q8K4J2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Gm7417-201ENSMUST00000192950 473 ntBASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ebf4Q8K4J2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf4Q8K4J2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Gm15820-201ENSMUST00000201566 728 ntBASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ebf4Q8K4J2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms