Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hist3h2bbQ8CGP0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hist3h2bbQ8CGP0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hist3h2bbQ8CGP0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hist3h2bbQ8CGP0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hist3h2bbQ8CGP0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hist3h2bbQ8CGP0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hist3h2bbQ8CGP0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hist3h2bbQ8CGP0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hist3h2bbQ8CGP0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms