Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Smc4Q8CG47 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC22.35■■□□□ 1.17
Smc4Q8CG47 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.35■■□□□ 1.17
Smc4Q8CG47 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Smc4Q8CG47 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Mir6349-201ENSMUST00000184059 97 ntBASIC22.34■■□□□ 1.17
Smc4Q8CG47 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Smc4Q8CG47 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.33■■□□□ 1.17
Smc4Q8CG47 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc4Q8CG47 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Smc4Q8CG47 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.33■■□□□ 1.17
Smc4Q8CG47 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Smc4Q8CG47 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc4Q8CG47 Mir1199-201ENSMUST00000117015 119 ntBASIC22.33■■□□□ 1.17
Smc4Q8CG47 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.33■■□□□ 1.17
Smc4Q8CG47 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc4Q8CG47 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Smc4Q8CG47 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Smc4Q8CG47 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Smc4Q8CG47 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc4Q8CG47 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.32■■□□□ 1.16
Smc4Q8CG47 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Smc4Q8CG47 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc4Q8CG47 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc4Q8CG47 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Smc4Q8CG47 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.32■■□□□ 1.16
Smc4Q8CG47 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.32■■□□□ 1.16
Smc4Q8CG47 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Smc4Q8CG47 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC22.31■■□□□ 1.16
Smc4Q8CG47 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Smc4Q8CG47 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.3■■□□□ 1.16
Smc4Q8CG47 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.3■■□□□ 1.16
Smc4Q8CG47 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
Smc4Q8CG47 AC121961.1-201ENSMUST00000218594 1779 ntBASIC22.3■■□□□ 1.16
Smc4Q8CG47 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Smc4Q8CG47 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc4Q8CG47 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Smc4Q8CG47 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Smc4Q8CG47 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc4Q8CG47 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.29■■□□□ 1.16
Smc4Q8CG47 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Smc4Q8CG47 Gm18025-201ENSMUST00000221733 862 ntBASIC22.29■■□□□ 1.16
Smc4Q8CG47 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc4Q8CG47 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Smc4Q8CG47 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Smc4Q8CG47 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Smc4Q8CG47 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc4Q8CG47 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc4Q8CG47 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc4Q8CG47 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.28■■□□□ 1.16
Smc4Q8CG47 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Smc4Q8CG47 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc4Q8CG47 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Smc4Q8CG47 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Smc4Q8CG47 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Smc4Q8CG47 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms