Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aph1bQ8C7N7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aph1bQ8C7N7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aph1bQ8C7N7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Gm7514-201ENSMUST00000209475 934 ntBASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aph1bQ8C7N7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Aph1bQ8C7N7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Aph1bQ8C7N7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Aph1bQ8C7N7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Aph1bQ8C7N7 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.9■□□□□ 0.46
Aph1bQ8C7N7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Aph1bQ8C7N7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Aph1bQ8C7N7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Aph1bQ8C7N7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Aph1bQ8C7N7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Aph1bQ8C7N7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Aph1bQ8C7N7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Aph1bQ8C7N7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Aph1bQ8C7N7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Aph1bQ8C7N7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Aph1bQ8C7N7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Aph1bQ8C7N7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms