Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdk5rap1Q8BTW8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdk5rap1Q8BTW8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Gm15375-201ENSMUST00000119510 849 ntBASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap1Q8BTW8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap1Q8BTW8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdk5rap1Q8BTW8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.13■□□□□ 0.33
Cdk5rap1Q8BTW8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms