Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Atpaf1Q811I0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Atpaf1Q811I0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atpaf1Q811I0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Atpaf1Q811I0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atpaf1Q811I0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atpaf1Q811I0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atpaf1Q811I0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atpaf1Q811I0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atpaf1Q811I0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atpaf1Q811I0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms