Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Otub1Q7TQI3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.25■□□□□ 0.35
Otub1Q7TQI3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Otub1Q7TQI3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Gm5874-201ENSMUST00000096101 508 ntBASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Otub1Q7TQI3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Gm13534-201ENSMUST00000121169 513 ntBASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Otub1Q7TQI3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Otub1Q7TQI3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms