Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Gm8969-201ENSMUST00000199694 526 ntBASIC18.63■□□□□ 0.57
Six1Q62231 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six1Q62231 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six1Q62231 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six1Q62231 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six1Q62231 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six1Q62231 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six1Q62231 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.62■□□□□ 0.57
Six1Q62231 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Six1Q62231 Gm10033-202ENSMUST00000211874 928 ntBASIC18.62■□□□□ 0.57
Six1Q62231 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six1Q62231 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six1Q62231 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six1Q62231 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six1Q62231 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.61■□□□□ 0.57
Six1Q62231 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Six1Q62231 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.61■□□□□ 0.57
Six1Q62231 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.61■□□□□ 0.57
Six1Q62231 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.61■□□□□ 0.57
Six1Q62231 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.61■□□□□ 0.57
Six1Q62231 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.61■□□□□ 0.57
Six1Q62231 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six1Q62231 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six1Q62231 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Six1Q62231 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six1Q62231 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six1Q62231 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.6■□□□□ 0.57
Six1Q62231 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six1Q62231 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.6■□□□□ 0.57
Six1Q62231 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six1Q62231 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Six1Q62231 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.6■□□□□ 0.57
Six1Q62231 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six1Q62231 Idnk-204ENSMUST00000226010 1898 ntBASIC18.6■□□□□ 0.57
Six1Q62231 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six1Q62231 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Six1Q62231 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Six1Q62231 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.6■□□□□ 0.57
Six1Q62231 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six1Q62231 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Six1Q62231 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six1Q62231 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.59■□□□□ 0.57
Six1Q62231 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Six1Q62231 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six1Q62231 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Six1Q62231 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Six1Q62231 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six1Q62231 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Six1Q62231 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Six1Q62231 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Six1Q62231 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Six1Q62231 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Six1Q62231 Gm42778-201ENSMUST00000199644 553 ntBASIC18.58■□□□□ 0.56
Six1Q62231 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six1Q62231 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six1Q62231 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six1Q62231 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Six1Q62231 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.57■□□□□ 0.56
Six1Q62231 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Six1Q62231 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Six1Q62231 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Six1Q62231 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Six1Q62231 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.56■□□□□ 0.56
Six1Q62231 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Six1Q62231 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.56■□□□□ 0.56
Six1Q62231 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Six1Q62231 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Six1Q62231 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms