Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Q3U1D9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.73■□□□□ 0.11
Q3U1D9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Q3U1D9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.73■□□□□ 0.11
Q3U1D9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Mir1199-201ENSMUST00000117015 119 ntBASIC15.73■□□□□ 0.11
Q3U1D9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Q3U1D9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.73■□□□□ 0.11
Q3U1D9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Q3U1D9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.73■□□□□ 0.11
Q3U1D9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Q3U1D9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Q3U1D9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Q3U1D9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Q3U1D9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Q3U1D9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.72■□□□□ 0.11
Q3U1D9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Q3U1D9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.72■□□□□ 0.11
Q3U1D9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Q3U1D9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.72■□□□□ 0.11
Q3U1D9 Gm15375-201ENSMUST00000119510 849 ntBASIC15.72■□□□□ 0.11
Q3U1D9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.72■□□□□ 0.11
Q3U1D9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Q3U1D9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Q3U1D9 Mir7071-201ENSMUST00000184847 69 ntBASIC15.72■□□□□ 0.11
Q3U1D9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Q3U1D9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Q3U1D9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Q3U1D9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Q3U1D9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Q3U1D9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Q3U1D9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Q3U1D9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.71■□□□□ 0.11
Q3U1D9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q3U1D9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Q3U1D9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Q3U1D9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Q3U1D9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Q3U1D9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Q3U1D9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.7■□□□□ 0.1
Q3U1D9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 Gm715-201ENSMUST00000117865 831 ntBASIC15.7■□□□□ 0.1
Q3U1D9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.7■□□□□ 0.1
Q3U1D9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.7■□□□□ 0.1
Q3U1D9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.7■□□□□ 0.1
Q3U1D9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Q3U1D9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Q3U1D9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q3U1D9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Q3U1D9 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.69■□□□□ 0.1
Q3U1D9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Q3U1D9 Mir6349-201ENSMUST00000184059 97 ntBASIC15.69■□□□□ 0.1
Q3U1D9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Q3U1D9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.69■□□□□ 0.1
Q3U1D9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.69■□□□□ 0.1
Q3U1D9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.69■□□□□ 0.1
Q3U1D9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.69■□□□□ 0.1
Q3U1D9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q3U1D9 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.69■□□□□ 0.1
Q3U1D9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.68■□□□□ 0.1
Q3U1D9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms