Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rps28P62858 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC10.85□□□□□ -0.67
Rps28P62858 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rps28P62858 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rps28P62858 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rps28P62858 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rps28P62858 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rps28P62858 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rps28P62858 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rps28P62858 Gm43213-201ENSMUST00000151866 1790 ntBASIC10.85□□□□□ -0.67
Rps28P62858 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Rps28P62858 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rps28P62858 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Gm45212-201ENSMUST00000205831 3403 ntBASIC10.84□□□□□ -0.67
Rps28P62858 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Rps28P62858 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.84□□□□□ -0.67
Rps28P62858 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.84□□□□□ -0.67
Rps28P62858 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rps28P62858 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rps28P62858 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC10.83□□□□□ -0.68
Rps28P62858 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rps28P62858 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.83□□□□□ -0.68
Rps28P62858 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rps28P62858 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rps28P62858 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rps28P62858 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Rps28P62858 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rps28P62858 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rps28P62858 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rps28P62858 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rps28P62858 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rps28P62858 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.81□□□□□ -0.68
Rps28P62858 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rps28P62858 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rps28P62858 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rps28P62858 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Rps28P62858 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rps28P62858 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms