Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4bP46467 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Vps4bP46467 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4bP46467 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4bP46467 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4bP46467 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4bP46467 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.4■□□□□ 0.54
Vps4bP46467 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Vps4bP46467 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4bP46467 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps4bP46467 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.39■□□□□ 0.53
Vps4bP46467 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Vps4bP46467 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.39■□□□□ 0.53
Vps4bP46467 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps4bP46467 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vps4bP46467 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Vps4bP46467 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.38■□□□□ 0.53
Vps4bP46467 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.38■□□□□ 0.53
Vps4bP46467 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.38■□□□□ 0.53
Vps4bP46467 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps4bP46467 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4bP46467 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4bP46467 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4bP46467 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4bP46467 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4bP46467 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.37■□□□□ 0.53
Vps4bP46467 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Vps4bP46467 Gm26571-201ENSMUST00000181399 666 ntBASIC18.37■□□□□ 0.53
Vps4bP46467 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4bP46467 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.37■□□□□ 0.53
Vps4bP46467 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.37■□□□□ 0.53
Vps4bP46467 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.37■□□□□ 0.53
Vps4bP46467 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.37■□□□□ 0.53
Vps4bP46467 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4bP46467 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps4bP46467 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Vps4bP46467 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Vps4bP46467 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Vps4bP46467 Rarb-207ENSMUST00000225921 2756 ntBASIC18.36■□□□□ 0.53
Vps4bP46467 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4bP46467 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4bP46467 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4bP46467 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps4bP46467 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vps4bP46467 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps4bP46467 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Vps4bP46467 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps4bP46467 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.34■□□□□ 0.53
Vps4bP46467 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps4bP46467 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps4bP46467 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vps4bP46467 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps4bP46467 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps4bP46467 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Vps4bP46467 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps4bP46467 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps4bP46467 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Vps4bP46467 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms