Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.68■□□□□ 0.58
Sdc4O35988 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Sdc4O35988 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc4O35988 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.68■□□□□ 0.58
Sdc4O35988 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.68■□□□□ 0.58
Sdc4O35988 Gm10138-203ENSMUST00000206952 366 ntBASIC18.68■□□□□ 0.58
Sdc4O35988 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc4O35988 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.68■□□□□ 0.58
Sdc4O35988 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc4O35988 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc4O35988 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc4O35988 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.68■□□□□ 0.58
Sdc4O35988 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.68■□□□□ 0.58
Sdc4O35988 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sdc4O35988 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Sdc4O35988 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.67■□□□□ 0.58
Sdc4O35988 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.67■□□□□ 0.58
Sdc4O35988 Mtag2-201ENSMUST00000058665 714 ntBASIC18.67■□□□□ 0.58
Sdc4O35988 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sdc4O35988 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sdc4O35988 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sdc4O35988 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sdc4O35988 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sdc4O35988 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.66■□□□□ 0.58
Sdc4O35988 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.66■□□□□ 0.58
Sdc4O35988 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.66■□□□□ 0.58
Sdc4O35988 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.66■□□□□ 0.58
Sdc4O35988 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.66■□□□□ 0.58
Sdc4O35988 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.66■□□□□ 0.58
Sdc4O35988 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sdc4O35988 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc4O35988 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.65■□□□□ 0.58
Sdc4O35988 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc4O35988 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sdc4O35988 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc4O35988 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc4O35988 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc4O35988 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sdc4O35988 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sdc4O35988 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.64■□□□□ 0.58
Sdc4O35988 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sdc4O35988 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.64■□□□□ 0.57
Sdc4O35988 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sdc4O35988 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.64■□□□□ 0.57
Sdc4O35988 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.63■□□□□ 0.57
Sdc4O35988 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Sdc4O35988 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.63■□□□□ 0.57
Sdc4O35988 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.63■□□□□ 0.57
Sdc4O35988 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Sdc4O35988 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.63■□□□□ 0.57
Sdc4O35988 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sdc4O35988 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sdc4O35988 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sdc4O35988 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sdc4O35988 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sdc4O35988 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms