Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Abca4O35600 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abca4O35600 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.09■□□□□ 0.33
Abca4O35600 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Abca4O35600 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Abca4O35600 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Abca4O35600 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abca4O35600 Gm11452-201ENSMUST00000122376 690 ntBASIC17.08■□□□□ 0.33
Abca4O35600 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Abca4O35600 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Abca4O35600 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Abca4O35600 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Abca4O35600 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.08■□□□□ 0.32
Abca4O35600 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Abca4O35600 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Abca4O35600 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.07■□□□□ 0.32
Abca4O35600 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.07■□□□□ 0.32
Abca4O35600 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.07■□□□□ 0.32
Abca4O35600 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Gm27702-201ENSMUST00000184512 56 ntBASIC17.07■□□□□ 0.32
Abca4O35600 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Abca4O35600 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Abca4O35600 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.06■□□□□ 0.32
Abca4O35600 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Abca4O35600 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.06■□□□□ 0.32
Abca4O35600 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Abca4O35600 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca4O35600 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Abca4O35600 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca4O35600 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Abca4O35600 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca4O35600 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Abca4O35600 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Abca4O35600 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Gm13884-201ENSMUST00000118103 829 ntBASIC17.05■□□□□ 0.32
Abca4O35600 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.05■□□□□ 0.32
Abca4O35600 Gm5186-201ENSMUST00000218781 920 ntBASIC17.05■□□□□ 0.32
Abca4O35600 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Abca4O35600 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Abca4O35600 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Abca4O35600 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Abca4O35600 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.04■□□□□ 0.32
Abca4O35600 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Abca4O35600 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Abca4O35600 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
Abca4O35600 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Gm5264-201ENSMUST00000190584 848 ntBASIC17.03■□□□□ 0.32
Abca4O35600 Gm43438-201ENSMUST00000198133 379 ntBASIC17.03■□□□□ 0.32
Abca4O35600 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Abca4O35600 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms