Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn6O35454 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.16■□□□□ 0.66
Clcn6O35454 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn6O35454 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Clcn6O35454 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.16■□□□□ 0.66
Clcn6O35454 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn6O35454 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn6O35454 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn6O35454 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Clcn6O35454 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn6O35454 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcn6O35454 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn6O35454 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn6O35454 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn6O35454 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn6O35454 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.15■□□□□ 0.66
Clcn6O35454 Gm18284-201ENSMUST00000172604 624 ntBASIC19.15■□□□□ 0.66
Clcn6O35454 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.15■□□□□ 0.66
Clcn6O35454 AC132881.2-201ENSMUST00000225474 709 ntBASIC19.15■□□□□ 0.66
Clcn6O35454 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn6O35454 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Clcn6O35454 Gm25131-201ENSMUST00000082653 151 ntBASIC19.15■□□□□ 0.66
Clcn6O35454 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcn6O35454 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Clcn6O35454 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Clcn6O35454 Gm8495-201ENSMUST00000188740 694 ntBASIC19.14■□□□□ 0.65
Clcn6O35454 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Clcn6O35454 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Clcn6O35454 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Clcn6O35454 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Clcn6O35454 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn6O35454 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Clcn6O35454 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.13■□□□□ 0.65
Clcn6O35454 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Clcn6O35454 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clcn6O35454 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Clcn6O35454 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clcn6O35454 Gm29013-201ENSMUST00000187431 237 ntBASIC19.13■□□□□ 0.65
Clcn6O35454 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.13■□□□□ 0.65
Clcn6O35454 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clcn6O35454 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC19.13■□□□□ 0.65
Clcn6O35454 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.13■□□□□ 0.65
Clcn6O35454 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn6O35454 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.12■□□□□ 0.65
Clcn6O35454 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.12■□□□□ 0.65
Clcn6O35454 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC19.12■□□□□ 0.65
Clcn6O35454 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.12■□□□□ 0.65
Clcn6O35454 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn6O35454 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Clcn6O35454 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Clcn6O35454 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.11■□□□□ 0.65
Clcn6O35454 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Clcn6O35454 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms