Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Grk6-206ENSMUST00000224995 2971 ntBASIC18.31■□□□□ 0.52
Sema3aO08665 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.31■□□□□ 0.52
Sema3aO08665 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.31■□□□□ 0.52
Sema3aO08665 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sema3aO08665 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.31■□□□□ 0.52
Sema3aO08665 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Sema3aO08665 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sema3aO08665 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sema3aO08665 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.3■□□□□ 0.52
Sema3aO08665 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.3■□□□□ 0.52
Sema3aO08665 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sema3aO08665 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sema3aO08665 Tgds-204ENSMUST00000228543 1594 ntBASIC18.3■□□□□ 0.52
Sema3aO08665 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sema3aO08665 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sema3aO08665 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sema3aO08665 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Sema3aO08665 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
Sema3aO08665 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Sema3aO08665 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Gm12441-201ENSMUST00000121806 588 ntBASIC18.29■□□□□ 0.52
Sema3aO08665 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.29■□□□□ 0.52
Sema3aO08665 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sema3aO08665 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sema3aO08665 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sema3aO08665 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sema3aO08665 Flg-201ENSMUST00000050758 1488 ntBASIC18.28■□□□□ 0.52
Sema3aO08665 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sema3aO08665 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.28■□□□□ 0.52
Sema3aO08665 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.28■□□□□ 0.52
Sema3aO08665 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sema3aO08665 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sema3aO08665 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.28■□□□□ 0.52
Sema3aO08665 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sema3aO08665 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sema3aO08665 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sema3aO08665 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sema3aO08665 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sema3aO08665 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sema3aO08665 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sema3aO08665 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sema3aO08665 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sema3aO08665 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sema3aO08665 Rarb-207ENSMUST00000225921 2756 ntBASIC18.26■□□□□ 0.51
Sema3aO08665 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.26■□□□□ 0.51
Sema3aO08665 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.26■□□□□ 0.51
Sema3aO08665 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sema3aO08665 Gm38285-201ENSMUST00000192928 922 ntBASIC18.26■□□□□ 0.51
Sema3aO08665 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.26■□□□□ 0.51
Sema3aO08665 Gm2559-201ENSMUST00000201323 363 ntBASIC18.26■□□□□ 0.51
Sema3aO08665 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sema3aO08665 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Sema3aO08665 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms