Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Reep4-203ENSMUST00000226563 1444 ntBASIC16.36■□□□□ 0.21
Pcdhgb8A0A140LI48 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhgb8A0A140LI48 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhgb8A0A140LI48 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhgb8A0A140LI48 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhgb8A0A140LI48 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pcdhgb8A0A140LI48 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgb8A0A140LI48 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgb8A0A140LI48 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgb8A0A140LI48 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhgb8A0A140LI48 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhgb8A0A140LI48 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhgb8A0A140LI48 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhgb8A0A140LI48 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhgb8A0A140LI48 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms