Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Nfatc1-203ENSMUST00000167977 4604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Ift122-201ENSMUST00000038234 4056 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 4732419C18Rik-201ENSMUST00000181805 3536 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Atp7b-202ENSMUST00000110738 4044 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim35Q8C006 Wdcp-206ENSMUST00000223551 4317 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trim35Q8C006 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm37522-201ENSMUST00000195437 2884 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Fam19a3-201ENSMUST00000139783 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Dhrs7b-202ENSMUST00000108718 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Car8-201ENSMUST00000066674 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Ttc16-207ENSMUST00000161950 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm21276-201ENSMUST00000179666 2626 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Rtp1-201ENSMUST00000038730 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Nnt-206ENSMUST00000223268 3339 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm14686-201ENSMUST00000119926 343 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm15729-201ENSMUST00000125829 360 ntTSL 3 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm17084-201ENSMUST00000163843 511 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Rbm4-201ENSMUST00000164209 801 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm6946-201ENSMUST00000182237 987 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm27813-201ENSMUST00000184343 354 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm28098-201ENSMUST00000191361 699 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm5550-201ENSMUST00000198658 1076 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm33347-201ENSMUST00000200003 681 ntTSL 2 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm20144-201ENSMUST00000203031 165 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm35857-201ENSMUST00000212739 178 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Trim35Q8C006 AC140477.2-201ENSMUST00000222037 322 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 AC133598.3-201ENSMUST00000224322 568 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Cryaa-206ENSMUST00000228716 1117 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Olfr550-201ENSMUST00000098225 1038 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gpr152-201ENSMUST00000096338 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm43827-201ENSMUST00000200623 1390 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Habp2-206ENSMUST00000166049 1650 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gpatch4-202ENSMUST00000166021 1768 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Pparg-201ENSMUST00000000450 1767 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 AC160029.1-201ENSMUST00000219628 2678 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Olfml2b-201ENSMUST00000046792 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm45767-201ENSMUST00000212778 4561 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm43684-201ENSMUST00000199279 6573 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Arhgef10l-205ENSMUST00000105798 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Rnasel-201ENSMUST00000086209 2938 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Mark3-206ENSMUST00000221459 2807 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Trim35Q8C006 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Rhag-201ENSMUST00000024721 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Gm43792-201ENSMUST00000202492 2210 ntBASIC9.31□□□□□ -0.92
Trim35Q8C006 Krt222-201ENSMUST00000038214 2042 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Zfp354b-203ENSMUST00000164280 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim35Q8C006 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Pax6-205ENSMUST00000111085 2779 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Dclre1c-203ENSMUST00000102988 2469 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Ifit1bl1-201ENSMUST00000112467 2193 ntAPPRIS P5 TSL 3 BASIC9.3□□□□□ -0.92
Trim35Q8C006 C1qtnf3-202ENSMUST00000110523 2088 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Snap47-201ENSMUST00000010038 1896 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm44639-201ENSMUST00000205859 3009 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms