Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm11825-201ENSMUST00000120710 736 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm43516-201ENSMUST00000196891 322 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm38670-201ENSMUST00000199248 77 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm7663-201ENSMUST00000201151 1240 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm44982-201ENSMUST00000208795 471 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 CT030254.1-201ENSMUST00000225450 1078 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 AC123665.4-201ENSMUST00000228790 249 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm43279-201ENSMUST00000202376 2512 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PrkdcP97313 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm28320-201ENSMUST00000187777 2273 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm13491-201ENSMUST00000118267 235 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm12308-201ENSMUST00000120440 389 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.25□□□□□ -1.73
PrkdcP97313 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
PrkdcP97313 AC163664.2-201ENSMUST00000228894 459 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
PrkdcP97313 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PrkdcP97313 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PrkdcP97313 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
PrkdcP97313 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm23774-201ENSMUST00000158990 131 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm17934-201ENSMUST00000192818 422 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm20786-201ENSMUST00000212649 436 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 AC122251.2-201ENSMUST00000227341 603 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm8534-201ENSMUST00000118553 766 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm23224-201ENSMUST00000158122 271 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms