Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Mir697-201ENSMUST00000102316 109 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm7831-201ENSMUST00000117990 552 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm12740-201ENSMUST00000118794 308 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm23079-201ENSMUST00000157847 117 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm7393-201ENSMUST00000172650 739 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Mir6357-201ENSMUST00000184246 104 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm38213-201ENSMUST00000193203 173 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Mir1892-201ENSMUST00000197752 80 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm43812-202ENSMUST00000202701 581 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm43596-201ENSMUST00000202818 884 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm19987-201ENSMUST00000216339 499 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm6369-201ENSMUST00000069626 412 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Nkd1Q99MH6 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm6746-201ENSMUST00000108774 483 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm13414-201ENSMUST00000117516 727 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm12219-201ENSMUST00000119198 443 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm15186-201ENSMUST00000119345 563 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm12383-201ENSMUST00000120628 760 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm14796-201ENSMUST00000121216 959 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm11385-201ENSMUST00000121513 570 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm14122-201ENSMUST00000122076 973 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm16248-201ENSMUST00000124238 243 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm24782-201ENSMUST00000157641 132 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Nkd1Q99MH6 Gm18430-201ENSMUST00000197534 682 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms