Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.56□□□□□ -1.2
Col1a1P11087 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Col1a1P11087 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm25013-201ENSMUST00000158402 128 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm34149-201ENSMUST00000203547 304 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm8667-201ENSMUST00000211112 449 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm7780-201ENSMUST00000214787 406 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm9088-201ENSMUST00000220237 508 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 AC164618.3-201ENSMUST00000224863 681 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm5514-201ENSMUST00000060477 306 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm22053-201ENSMUST00000083394 200 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col1a1P11087 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col1a1P11087 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col1a1P11087 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.55□□□□□ -1.2
Col1a1P11087 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Col1a1P11087 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.55□□□□□ -1.2
Col1a1P11087 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm5073-201ENSMUST00000118222 820 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm16423-201ENSMUST00000120078 947 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm26381-201ENSMUST00000174895 92 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm8524-201ENSMUST00000186232 379 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm5886-202ENSMUST00000203957 522 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC7.55□□□□□ -1.2
Col1a1P11087 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col1a1P11087 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col1a1P11087 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.55□□□□□ -1.2
Col1a1P11087 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Col1a1P11087 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.54□□□□□ -1.2
Col1a1P11087 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col1a1P11087 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col1a1P11087 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.54□□□□□ -1.2
Col1a1P11087 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col1a1P11087 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
Col1a1P11087 Gm29438-201ENSMUST00000191298 2613 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col1a1P11087 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Col1a1P11087 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Col1a1P11087 Gm26023-201ENSMUST00000122722 313 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col1a1P11087 Gm23662-201ENSMUST00000158046 111 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Gm3008-201ENSMUST00000160566 571 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC7.54□□□□□ -1.2
Col1a1P11087 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.54□□□□□ -1.2
Col1a1P11087 Gm45724-201ENSMUST00000213031 420 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Col1a1P11087 AC192333.6-201ENSMUST00000224565 725 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Col1a1P11087 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Col1a1P11087 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col1a1P11087 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col1a1P11087 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.54□□□□□ -1.2
Col1a1P11087 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col1a1P11087 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.53□□□□□ -1.2
Col1a1P11087 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC7.53□□□□□ -1.2
Col1a1P11087 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col1a1P11087 Gm14550-201ENSMUST00000117918 407 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms