Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Lsm1Q8VC85 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm22533-201ENSMUST00000158821 274 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm24735-201ENSMUST00000158859 118 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm22119-201ENSMUST00000175594 99 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm27006-201ENSMUST00000182218 943 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm27156-201ENSMUST00000184589 754 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm28846-201ENSMUST00000189161 368 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm18849-201ENSMUST00000189861 560 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm29072-201ENSMUST00000191149 678 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm37380-201ENSMUST00000193752 397 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm8182-201ENSMUST00000197863 769 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm44225-201ENSMUST00000203582 186 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm44265-201ENSMUST00000203631 465 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm18618-201ENSMUST00000222211 473 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lsm1Q8VC85 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm22256-201ENSMUST00000102291 107 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm22235-201ENSMUST00000157085 110 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm25395-201ENSMUST00000157343 272 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm23077-201ENSMUST00000157854 116 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm23071-201ENSMUST00000158242 115 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm9517-201ENSMUST00000195021 874 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm43383-201ENSMUST00000195981 469 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 Gm44984-201ENSMUST00000207802 394 ntBASIC6.23□□□□□ -1.41
Lsm1Q8VC85 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms