Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC4.27□□□□□ -1.73
PrkdcP97313 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm24117-201ENSMUST00000103973 133 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm13866-201ENSMUST00000118901 968 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm7890-201ENSMUST00000204877 601 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PrkdcP97313 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm37216-201ENSMUST00000193817 3478 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Gm18100-201ENSMUST00000200897 452 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 AC115793.1-201ENSMUST00000216605 215 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC4.27□□□□□ -1.73
PrkdcP97313 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.27□□□□□ -1.73
PrkdcP97313 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PrkdcP97313 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm43900-201ENSMUST00000204868 2669 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 AC152922.2-201ENSMUST00000213353 3879 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm16082-201ENSMUST00000115992 377 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Gm12074-201ENSMUST00000120189 219 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm18904-201ENSMUST00000218756 329 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 AC156802.1-201ENSMUST00000223623 579 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PrkdcP97313 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PrkdcP97313 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm15000-201ENSMUST00000118275 1243 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm44382-201ENSMUST00000198683 122 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.27□□□□□ -1.73
PrkdcP97313 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PrkdcP97313 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PrkdcP97313 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PrkdcP97313 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm12937-201ENSMUST00000118333 448 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm12399-201ENSMUST00000121475 446 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm12754-201ENSMUST00000121908 454 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.26□□□□□ -1.73
PrkdcP97313 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms