Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NcanP55066 Gm38299-201ENSMUST00000193214 3789 ntBASIC7.04□□□□□ -1.28
NcanP55066 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.03□□□□□ -1.28
NcanP55066 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.03□□□□□ -1.28
NcanP55066 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Gm7146-201ENSMUST00000116079 739 ntBASIC7.03□□□□□ -1.28
NcanP55066 Mir1193-201ENSMUST00000116761 121 ntBASIC7.03□□□□□ -1.28
NcanP55066 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NcanP55066 Gm12287-201ENSMUST00000119770 707 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm7931-201ENSMUST00000121537 271 ntBASIC7.03□□□□□ -1.28
NcanP55066 Klra13-ps-201ENSMUST00000125813 802 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC7.03□□□□□ -1.28
NcanP55066 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.03□□□□□ -1.28
NcanP55066 Gm24216-201ENSMUST00000158259 117 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm29376-201ENSMUST00000189357 835 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm43712-201ENSMUST00000198020 291 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm43054-201ENSMUST00000199495 884 ntBASIC7.03□□□□□ -1.28
NcanP55066 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC7.03□□□□□ -1.28
NcanP55066 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.03□□□□□ -1.28
NcanP55066 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.03□□□□□ -1.28
NcanP55066 Gm2996-201ENSMUST00000211398 537 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm7570-201ENSMUST00000215246 698 ntBASIC7.03□□□□□ -1.28
NcanP55066 AC073947.1-201ENSMUST00000216991 649 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm9110-201ENSMUST00000219035 617 ntBASIC7.03□□□□□ -1.28
NcanP55066 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC7.03□□□□□ -1.28
NcanP55066 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.03□□□□□ -1.28
NcanP55066 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.03□□□□□ -1.28
NcanP55066 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NcanP55066 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Gm15732-201ENSMUST00000079794 480 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm24454-201ENSMUST00000083349 132 ntBASIC7.03□□□□□ -1.28
NcanP55066 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Gm28320-201ENSMUST00000187777 2273 ntBASIC7.03□□□□□ -1.28
NcanP55066 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.03□□□□□ -1.28
NcanP55066 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NcanP55066 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NcanP55066 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.02□□□□□ -1.28
NcanP55066 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
NcanP55066 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
NcanP55066 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.28
NcanP55066 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.02□□□□□ -1.28
NcanP55066 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Gm43085-201ENSMUST00000202859 3132 ntBASIC7.02□□□□□ -1.29
NcanP55066 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
NcanP55066 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC7.02□□□□□ -1.29
NcanP55066 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NcanP55066 Gm8501-201ENSMUST00000117684 432 ntBASIC7.02□□□□□ -1.29
NcanP55066 Gm16276-201ENSMUST00000131218 262 ntBASIC7.02□□□□□ -1.29
NcanP55066 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.02□□□□□ -1.29
NcanP55066 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Gm23894-201ENSMUST00000158107 313 ntBASIC7.02□□□□□ -1.29
NcanP55066 Gm23071-201ENSMUST00000158242 115 ntBASIC7.02□□□□□ -1.29
NcanP55066 Mir3080-201ENSMUST00000175010 79 ntBASIC7.02□□□□□ -1.29
NcanP55066 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Gm8192-201ENSMUST00000182196 958 ntBASIC7.02□□□□□ -1.29
NcanP55066 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC7.02□□□□□ -1.29
NcanP55066 Gm37380-201ENSMUST00000193752 397 ntBASIC7.02□□□□□ -1.29
NcanP55066 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.02□□□□□ -1.29
NcanP55066 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC7.02□□□□□ -1.29
NcanP55066 Gm44768-201ENSMUST00000205719 393 ntBASIC7.02□□□□□ -1.29
NcanP55066 AC133650.1-201ENSMUST00000217243 578 ntBASIC7.02□□□□□ -1.29
NcanP55066 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.02□□□□□ -1.29
NcanP55066 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NcanP55066 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
NcanP55066 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
NcanP55066 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NcanP55066 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms