Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC7.83□□□□□ -1.16
Clp1Q99LI9 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Clp1Q99LI9 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 AC159635.1-201ENSMUST00000220905 2102 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm14912-201ENSMUST00000120166 1773 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm36938-201ENSMUST00000191612 2696 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm12939-201ENSMUST00000117303 165 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm5943-201ENSMUST00000119458 459 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm11617-201ENSMUST00000119609 639 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm5387-201ENSMUST00000119776 857 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Klra11-ps-201ENSMUST00000122033 810 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm13194-201ENSMUST00000142299 311 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm26183-201ENSMUST00000157685 139 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Spanxn4-201ENSMUST00000172433 424 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm18808-201ENSMUST00000173316 462 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Mir6244-201ENSMUST00000184156 117 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm38279-201ENSMUST00000194067 1131 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm43768-201ENSMUST00000198380 1258 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm42646-201ENSMUST00000202233 914 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm25135-201ENSMUST00000082648 143 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Clp1Q99LI9 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm44007-201ENSMUST00000203845 2189 ntBASIC7.81□□□□□ -1.16
Clp1Q99LI9 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7.81□□□□□ -1.16
Clp1Q99LI9 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clp1Q99LI9 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms