Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm36431-202ENSMUST00000209956 687 ntTSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm45313-201ENSMUST00000210584 178 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Ldhc-205ENSMUST00000211784 829 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 AC154706.1-201ENSMUST00000225482 585 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 AC125311.1-201ENSMUST00000226950 220 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 AC122459.4-201ENSMUST00000228654 551 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Eif3g-201ENSMUST00000004206 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Clrn2-201ENSMUST00000053250 944 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Lrrc71-201ENSMUST00000023846 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Slc29a3-202ENSMUST00000119595 3123 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Scgn-201ENSMUST00000021770 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Kcnj3-202ENSMUST00000112632 4068 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Hmgcs1-201ENSMUST00000179869 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Dmbx1-202ENSMUST00000084338 4031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 4933412E24Rik-201ENSMUST00000096421 1748 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm43961-201ENSMUST00000203289 1872 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Mrpl48-201ENSMUST00000064334 1865 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm6088-201ENSMUST00000117257 2539 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Hps1-202ENSMUST00000069298 3196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trim35Q8C006 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm37311-201ENSMUST00000195541 2024 ntBASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Mmp27-202ENSMUST00000151853 1673 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trim35Q8C006 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim35Q8C006 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Fgf9-203ENSMUST00000165526 3593 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 A430078G23Rik-201ENSMUST00000098966 2945 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trim35Q8C006 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Tox-201ENSMUST00000039987 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Sfmbt2-203ENSMUST00000114862 1763 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm43847-201ENSMUST00000200070 1940 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Inpp5k-201ENSMUST00000006286 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Atp6v0e-202ENSMUST00000167352 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Ebf1-201ENSMUST00000081265 5981 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm7910-201ENSMUST00000117896 835 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm12508-201ENSMUST00000121282 480 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm12293-201ENSMUST00000121898 590 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm24836-201ENSMUST00000122609 108 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm8865-201ENSMUST00000125697 430 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm12364-201ENSMUST00000144419 547 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm12061-201ENSMUST00000151881 479 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm22819-201ENSMUST00000157445 303 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm25706-201ENSMUST00000157828 247 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm22388-201ENSMUST00000158194 248 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm16545-201ENSMUST00000161968 463 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Mir5108-201ENSMUST00000175276 85 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Pvt1-201ENSMUST00000180432 1563 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm7545-201ENSMUST00000182773 1008 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim35Q8C006 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Supt20-211ENSMUST00000200441 2154 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm45026-201ENSMUST00000205292 833 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm44820-201ENSMUST00000207420 396 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm39128-201ENSMUST00000208237 1094 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC9.35□□□□□ -0.91
Trim35Q8C006 AC155293.1-201ENSMUST00000219793 1026 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 CR974487.1-201ENSMUST00000220984 413 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 AC154556.1-201ENSMUST00000224587 885 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Washc5-202ENSMUST00000227725 2618 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 AC127371.1-201ENSMUST00000228516 312 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Ctsw-201ENSMUST00000025844 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm24705-201ENSMUST00000082808 107 ntBASIC9.35□□□□□ -0.91
Trim35Q8C006 Gm23503-201ENSMUST00000083903 107 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms