Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
HttP42859 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Gm16128-201ENSMUST00000117855 626 ntBASIC6.62□□□□□ -1.35
HttP42859 Gm14331-201ENSMUST00000120396 409 ntBASIC6.62□□□□□ -1.35
HttP42859 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC6.62□□□□□ -1.35
HttP42859 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.62□□□□□ -1.35
HttP42859 Gm42720-201ENSMUST00000196813 300 ntBASIC6.62□□□□□ -1.35
HttP42859 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.62□□□□□ -1.35
HttP42859 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HttP42859 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.62□□□□□ -1.35
HttP42859 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HttP42859 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.61□□□□□ -1.35
HttP42859 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HttP42859 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
HttP42859 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
HttP42859 Gm13679-201ENSMUST00000118678 484 ntBASIC6.61□□□□□ -1.35
HttP42859 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.61□□□□□ -1.35
HttP42859 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
HttP42859 Gm18752-201ENSMUST00000192876 608 ntBASIC6.61□□□□□ -1.35
HttP42859 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.61□□□□□ -1.35
HttP42859 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.61□□□□□ -1.35
HttP42859 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.61□□□□□ -1.35
HttP42859 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.61□□□□□ -1.35
HttP42859 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Gm23224-201ENSMUST00000158122 271 ntBASIC6.61□□□□□ -1.35
HttP42859 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.61□□□□□ -1.35
HttP42859 AC096628.1-201ENSMUST00000226060 641 ntBASIC6.61□□□□□ -1.35
HttP42859 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.61□□□□□ -1.35
HttP42859 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
HttP42859 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HttP42859 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.61□□□□□ -1.35
HttP42859 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 AC156025.3-201ENSMUST00000225919 3095 ntBASIC6.61□□□□□ -1.35
HttP42859 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HttP42859 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
HttP42859 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.61□□□□□ -1.35
HttP42859 Gm13473-201ENSMUST00000119289 367 ntBASIC6.61□□□□□ -1.35
HttP42859 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
HttP42859 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.61□□□□□ -1.35
HttP42859 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Gm43524-201ENSMUST00000197278 298 ntBASIC6.61□□□□□ -1.35
HttP42859 Gm36448-201ENSMUST00000199916 438 ntBASIC6.61□□□□□ -1.35
HttP42859 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.61□□□□□ -1.35
HttP42859 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.61□□□□□ -1.35
HttP42859 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HttP42859 Mir133b-201ENSMUST00000083546 119 ntBASIC6.61□□□□□ -1.35
HttP42859 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HttP42859 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.6□□□□□ -1.35
HttP42859 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Cdk12-202ENSMUST00000107538 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 1700020I14Rik-202ENSMUST00000153581 8300 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.6□□□□□ -1.35
HttP42859 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Gm12074-201ENSMUST00000120189 219 ntBASIC6.6□□□□□ -1.35
HttP42859 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC6.6□□□□□ -1.35
HttP42859 Gm24685-201ENSMUST00000157764 285 ntBASIC6.6□□□□□ -1.35
HttP42859 Gm44048-201ENSMUST00000204531 361 ntBASIC6.6□□□□□ -1.35
HttP42859 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
HttP42859 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HttP42859 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms