Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
Upf3bQ3ULL6 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.97□□□□□ -1.29
Upf3bQ3ULL6 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Upf3bQ3ULL6 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm22267-201ENSMUST00000104008 131 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm25057-201ENSMUST00000157366 88 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm27601-201ENSMUST00000184794 127 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm7804-202ENSMUST00000194187 854 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm42799-201ENSMUST00000201331 328 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm7769-201ENSMUST00000212900 933 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 AC173482.3-201ENSMUST00000225492 1212 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Glycam1-204ENSMUST00000228895 641 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Upf3bQ3ULL6 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm13156-201ENSMUST00000118348 321 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm14300-201ENSMUST00000120800 946 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm8089-201ENSMUST00000122463 968 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm11545-201ENSMUST00000146507 375 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm38030-201ENSMUST00000192376 475 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms