Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm46379-201ENSMUST00000222551 265 ntBASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm43982-201ENSMUST00000204995 1829 ntBASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 AC166574.1-201ENSMUST00000226916 1309 ntBASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm24173-201ENSMUST00000104130 128 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm6181-201ENSMUST00000117187 264 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm37375-201ENSMUST00000193859 387 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm37385-201ENSMUST00000195223 387 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm43798-201ENSMUST00000202056 394 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm8863-201ENSMUST00000216630 926 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.9□□□□□ -1.47
Col6a6Q8C6K9 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 AC158988.1-201ENSMUST00000226731 2624 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm24733-201ENSMUST00000158863 253 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm2325-201ENSMUST00000186637 581 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm6137-201ENSMUST00000187552 578 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm35013-201ENSMUST00000197218 832 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm18838-201ENSMUST00000204855 886 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm45750-201ENSMUST00000211966 354 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm17950-201ENSMUST00000214617 646 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a6Q8C6K9 Gm25919-201ENSMUST00000104271 132 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm23910-201ENSMUST00000104597 132 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm13991-201ENSMUST00000120190 648 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm22690-201ENSMUST00000175054 110 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm8581-201ENSMUST00000188636 890 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm10416-201ENSMUST00000197379 645 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 132.8 ms