Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm17165-201ENSMUST00000096155 493 ntBASIC4.34□□□□□ -1.71
PrkdcP97313 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PrkdcP97313 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PrkdcP97313 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PrkdcP97313 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
PrkdcP97313 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PrkdcP97313 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PrkdcP97313 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
PrkdcP97313 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PrkdcP97313 CT572985.1-201ENSMUST00000220599 4714 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 CT010514.1-201ENSMUST00000214088 2969 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 Gm14294-201ENSMUST00000119749 751 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 Gm8545-201ENSMUST00000120692 801 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
PrkdcP97313 Gm43712-201ENSMUST00000198020 291 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC4.34□□□□□ -1.72
PrkdcP97313 Gm18413-201ENSMUST00000221573 655 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 AC154484.2-201ENSMUST00000228359 818 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PrkdcP97313 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
PrkdcP97313 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
PrkdcP97313 Mir17-201ENSMUST00000083574 84 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
PrkdcP97313 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PrkdcP97313 Gm15575-201ENSMUST00000119414 1581 ntBASIC4.34□□□□□ -1.72
PrkdcP97313 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.34□□□□□ -1.72
PrkdcP97313 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PrkdcP97313 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PrkdcP97313 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PrkdcP97313 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PrkdcP97313 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PrkdcP97313 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
PrkdcP97313 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
PrkdcP97313 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm11805-201ENSMUST00000121238 600 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.33□□□□□ -1.72
PrkdcP97313 Mir1947-201ENSMUST00000158235 85 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.33□□□□□ -1.72
PrkdcP97313 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Gm42799-201ENSMUST00000201331 328 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm9231-201ENSMUST00000220817 1009 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.33□□□□□ -1.72
PrkdcP97313 AC156016.5-201ENSMUST00000228742 355 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PrkdcP97313 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm38085-201ENSMUST00000195785 3062 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Ncor1-202ENSMUST00000037575 4246 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 AC136019.1-201ENSMUST00000226503 1412 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm29160-201ENSMUST00000190094 699 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Gm17775-201ENSMUST00000198542 258 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PrkdcP97313 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm18587-201ENSMUST00000213736 841 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Gm46379-201ENSMUST00000222551 265 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PrkdcP97313 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PrkdcP97313 Gm37139-201ENSMUST00000192134 4419 ntBASIC4.33□□□□□ -1.72
PrkdcP97313 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms