Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 AC115760.1-201ENSMUST00000225160 1327 ntBASIC8.89□□□□□ -0.99
Nphp4P59240 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Nphp4P59240 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm24434-201ENSMUST00000104081 132 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm22371-201ENSMUST00000104588 130 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm14158-201ENSMUST00000118409 308 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm25387-201ENSMUST00000157813 132 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm27653-201ENSMUST00000185037 136 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm7663-201ENSMUST00000201151 1240 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm44075-201ENSMUST00000204208 216 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm44571-201ENSMUST00000208092 533 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.88□□□□□ -0.99
Nphp4P59240 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.88□□□□□ -0.99
Nphp4P59240 AV026068-216ENSMUST00000223874 328 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 AV026068-218ENSMUST00000223980 575 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 AC159979.1-201ENSMUST00000227927 342 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Nphp4P59240 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.88□□□□□ -0.99
Nphp4P59240 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Nphp4P59240 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC8.88□□□□□ -0.99
Nphp4P59240 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.88□□□□□ -0.99
Nphp4P59240 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm14580-201ENSMUST00000119122 718 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm12244-201ENSMUST00000119500 291 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm6446-201ENSMUST00000120604 818 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm24179-201ENSMUST00000158925 127 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm8860-201ENSMUST00000193160 445 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm37784-201ENSMUST00000193233 189 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Ighv1-10-201ENSMUST00000194372 355 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm44422-201ENSMUST00000204142 1025 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC8.88□□□□□ -0.99
Nphp4P59240 AC105407.1-201ENSMUST00000225684 614 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Gm8256-203ENSMUST00000228692 591 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
Nphp4P59240 Gm25515-201ENSMUST00000083858 157 ntBASIC8.88□□□□□ -0.99
Nphp4P59240 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Nphp4P59240 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 AC151904.1-201ENSMUST00000219945 1498 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nphp4P59240 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Nphp4P59240 Gm13772-201ENSMUST00000118431 317 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Gm14900-201ENSMUST00000120304 733 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC8.87□□□□□ -0.99
Nphp4P59240 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC8.87□□□□□ -0.99
Nphp4P59240 Mir7072-201ENSMUST00000184542 60 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Gm43501-201ENSMUST00000202513 107 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Gm44091-201ENSMUST00000205212 649 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
Nphp4P59240 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 Gm7780-201ENSMUST00000214787 406 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 AC122251.2-201ENSMUST00000227341 603 ntBASIC8.87□□□□□ -0.99
Nphp4P59240 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Nphp4P59240 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Nphp4P59240 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.86□□□□□ -0.99
Nphp4P59240 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Nphp4P59240 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Nphp4P59240 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nphp4P59240 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Nphp4P59240 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms