Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.46□□□□□ -1.22
Col2a1P28481 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.46□□□□□ -1.22
Col2a1P28481 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Col2a1P28481 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.46□□□□□ -1.22
Col2a1P28481 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
Col2a1P28481 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col2a1P28481 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
Col2a1P28481 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col2a1P28481 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col2a1P28481 Gm22371-201ENSMUST00000104588 130 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Gm14173-201ENSMUST00000117690 278 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Gm13604-201ENSMUST00000119332 482 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.45□□□□□ -1.22
Col2a1P28481 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col2a1P28481 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col2a1P28481 Gm27653-201ENSMUST00000185037 136 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Gm7891-201ENSMUST00000190284 843 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Gm4332-201ENSMUST00000196114 346 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Gm8454-201ENSMUST00000196980 811 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Gm17824-201ENSMUST00000197690 805 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col2a1P28481 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.45□□□□□ -1.22
Col2a1P28481 Gm18839-201ENSMUST00000204292 670 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.45□□□□□ -1.22
Col2a1P28481 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.45□□□□□ -1.22
Col2a1P28481 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.45□□□□□ -1.22
Col2a1P28481 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Col2a1P28481 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col2a1P28481 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
Col2a1P28481 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col2a1P28481 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Col2a1P28481 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Col2a1P28481 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Col2a1P28481 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Col2a1P28481 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm12874-201ENSMUST00000117190 913 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Gm22276-201ENSMUST00000122469 129 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm25387-201ENSMUST00000157813 132 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.44□□□□□ -1.22
Col2a1P28481 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm34768-201ENSMUST00000193884 565 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Ighv1-10-201ENSMUST00000194372 355 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.44□□□□□ -1.22
Col2a1P28481 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.44□□□□□ -1.22
Col2a1P28481 Gm33312-201ENSMUST00000222443 332 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Col2a1P28481 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.44□□□□□ -1.22
Col2a1P28481 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col2a1P28481 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.44□□□□□ -1.22
Col2a1P28481 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms