Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 SNORA78-201ENST00000459373 127 ntBASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 AC010542.4-201ENST00000563151 1910 ntBASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 CYP21A1P-202ENST00000354927 1481 ntBASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 AC080038.3-201ENST00000623346 1952 ntBASIC21.87■■□□□ 1.09
HCFC2Q9Y5Z7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 ECEL1P3-201ENST00000427961 737 ntBASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
HCFC2Q9Y5Z7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 C1orf229-201ENST00000623686 2258 ntBASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HCFC2Q9Y5Z7 AC068473.5-201ENST00000616428 2072 ntBASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 POM121L13P-201ENST00000422362 380 ntBASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC2Q9Y5Z7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC2Q9Y5Z7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms