Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB1Q9Y5G3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB1Q9Y5G3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB1Q9Y5G3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 pRNA.6-201ENST00000610482 90 ntBASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 pRNA.5-201ENST00000612139 90 ntBASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 pRNA.11-201ENST00000618423 90 ntBASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 pRNA.13-201ENST00000619112 90 ntBASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB1Q9Y5G3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB1Q9Y5G3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 MIR6724-1-201ENST00000616420 92 ntBASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 MIR6724-2-201ENST00000616483 92 ntBASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 MIR6724-4-201ENST00000617390 92 ntBASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 MIR6724-3-201ENST00000622482 92 ntBASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGB1Q9Y5G3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGB1Q9Y5G3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms