Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube4bQ9ES00 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.48■□□□□ 0.39
Ube4bQ9ES00 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube4bQ9ES00 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ube4bQ9ES00 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube4bQ9ES00 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube4bQ9ES00 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.44■□□□□ 0.38
Ube4bQ9ES00 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4bQ9ES00 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms