Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.66■□□□□ 0.26
Hmg20aQ9DC33 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmg20aQ9DC33 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmg20aQ9DC33 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmg20aQ9DC33 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmg20aQ9DC33 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Hmg20aQ9DC33 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmg20aQ9DC33 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmg20aQ9DC33 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmg20aQ9DC33 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hmg20aQ9DC33 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmg20aQ9DC33 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmg20aQ9DC33 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hmg20aQ9DC33 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hmg20aQ9DC33 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmg20aQ9DC33 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmg20aQ9DC33 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hmg20aQ9DC33 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.6■□□□□ 0.25
Hmg20aQ9DC33 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hmg20aQ9DC33 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmg20aQ9DC33 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmg20aQ9DC33 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms