Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtn4Q99P72 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.02■■□□□ 1.28
Rtn4Q99P72 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Rtn4Q99P72 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
Rtn4Q99P72 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Fam105a-203ENSMUST00000226170 3043 ntBASIC23.01■■□□□ 1.27
Rtn4Q99P72 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.01■■□□□ 1.27
Rtn4Q99P72 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.01■■□□□ 1.27
Rtn4Q99P72 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtn4Q99P72 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Gm2559-201ENSMUST00000201323 363 ntBASIC23■■□□□ 1.27
Rtn4Q99P72 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rtn4Q99P72 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Gm37102-201ENSMUST00000195740 1105 ntBASIC22.99■■□□□ 1.27
Rtn4Q99P72 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtn4Q99P72 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rtn4Q99P72 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Gm20614-201ENSMUST00000177106 632 ntBASIC22.97■■□□□ 1.27
Rtn4Q99P72 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Gm37744-201ENSMUST00000194616 1590 ntBASIC22.97■■□□□ 1.27
Rtn4Q99P72 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Rtn4Q99P72 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.96■■□□□ 1.27
Rtn4Q99P72 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Rtn4Q99P72 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtn4Q99P72 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms