Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd1Q99J36 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd1Q99J36 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Tgds-204ENSMUST00000228543 1594 ntBASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd1Q99J36 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd1Q99J36 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.21■□□□□ 0.19
Thumpd1Q99J36 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Thumpd1Q99J36 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd1Q99J36 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd1Q99J36 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd1Q99J36 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms