Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdha11Q91Y19 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdha11Q91Y19 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Gm11249-201ENSMUST00000117071 859 ntBASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdha11Q91Y19 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdha11Q91Y19 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdha11Q91Y19 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Gm22240-201ENSMUST00000175225 82 ntBASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha11Q91Y19 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdha11Q91Y19 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Pcdha11Q91Y19 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha11Q91Y19 Gm11927-201ENSMUST00000118472 759 ntBASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha11Q91Y19 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha11Q91Y19 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms