Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.74■□□□□ 0.43
Q8VDP2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Q8VDP2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q8VDP2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Q8VDP2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Q8VDP2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Q8VDP2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Q8VDP2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Q8VDP2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.73■□□□□ 0.43
Q8VDP2 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.73■□□□□ 0.43
Q8VDP2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.73■□□□□ 0.43
Q8VDP2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q8VDP2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q8VDP2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q8VDP2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q8VDP2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q8VDP2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q8VDP2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.72■□□□□ 0.43
Q8VDP2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Q8VDP2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Q8VDP2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q8VDP2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Q8VDP2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.71■□□□□ 0.43
Q8VDP2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.71■□□□□ 0.43
Q8VDP2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.71■□□□□ 0.43
Q8VDP2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q8VDP2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Q8VDP2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Q8VDP2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Q8VDP2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.7■□□□□ 0.42
Q8VDP2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Q8VDP2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q8VDP2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Q8VDP2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.69■□□□□ 0.42
Q8VDP2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Q8VDP2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q8VDP2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q8VDP2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms