Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cuedc1Q8R3V6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cuedc1Q8R3V6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Gm15378-201ENSMUST00000121894 207 ntBASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.44■□□□□ 0.22
Cuedc1Q8R3V6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Gm15565-201ENSMUST00000118890 427 ntBASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Gm37055-201ENSMUST00000191866 133 ntBASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cuedc1Q8R3V6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Mir1199-201ENSMUST00000117015 119 ntBASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cuedc1Q8R3V6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cuedc1Q8R3V6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms