Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Gm10138-203ENSMUST00000206952 366 ntBASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rdh1Q8CGV4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Gm6576-201ENSMUST00000169678 883 ntBASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.67■□□□□ 0.42
Rdh1Q8CGV4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rdh1Q8CGV4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rdh1Q8CGV4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rdh1Q8CGV4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rdh1Q8CGV4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 Gm15375-201ENSMUST00000119510 849 ntBASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rdh1Q8CGV4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.63■□□□□ 0.41
Rdh1Q8CGV4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Rdh1Q8CGV4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh1Q8CGV4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.62■□□□□ 0.41
Rdh1Q8CGV4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh1Q8CGV4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh1Q8CGV4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh1Q8CGV4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rdh1Q8CGV4 Mir6982-201ENSMUST00000184354 68 ntBASIC17.62■□□□□ 0.41
Rdh1Q8CGV4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms