Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Ptcd1Q8C2E4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Gm27741-201ENSMUST00000185060 237 ntBASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ptcd1Q8C2E4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Gm7889-201ENSMUST00000185591 958 ntBASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ptcd1Q8C2E4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ptcd1Q8C2E4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ptcd1Q8C2E4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Ptcd1Q8C2E4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Ptcd1Q8C2E4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ptcd1Q8C2E4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.39■■□□□ 1.17
Ptcd1Q8C2E4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptcd1Q8C2E4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.39■■□□□ 1.17
Ptcd1Q8C2E4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC22.39■■□□□ 1.17
Ptcd1Q8C2E4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptcd1Q8C2E4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptcd1Q8C2E4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Ptcd1Q8C2E4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptcd1Q8C2E4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Odf3b-204ENSMUST00000227834 930 ntBASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ptcd1Q8C2E4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms