Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Fam43aQ8BUP8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam43aQ8BUP8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam43aQ8BUP8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam43aQ8BUP8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Fam43aQ8BUP8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam43aQ8BUP8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fam43aQ8BUP8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fam43aQ8BUP8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.14■□□□□ 0.82
Fam43aQ8BUP8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fam43aQ8BUP8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Fam43aQ8BUP8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Fam43aQ8BUP8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Fam43aQ8BUP8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
Fam43aQ8BUP8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms