Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp1Q8BJQ2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Usp1Q8BJQ2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Gm15565-201ENSMUST00000118890 427 ntBASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Zfp783-201ENSMUST00000095946 670 ntBASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Usp1Q8BJQ2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Usp1Q8BJQ2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp1Q8BJQ2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp1Q8BJQ2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Mir5122-201ENSMUST00000175004 89 ntBASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Gm10138-203ENSMUST00000206952 366 ntBASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp1Q8BJQ2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Gm11643-201ENSMUST00000119578 864 ntBASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp1Q8BJQ2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp1Q8BJQ2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms