Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim50Q810I2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim50Q810I2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim50Q810I2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim50Q810I2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.74■□□□□ 0.43
Trim50Q810I2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim50Q810I2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim50Q810I2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.74■□□□□ 0.43
Trim50Q810I2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim50Q810I2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim50Q810I2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trim50Q810I2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim50Q810I2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.73■□□□□ 0.43
Trim50Q810I2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.73■□□□□ 0.43
Trim50Q810I2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim50Q810I2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim50Q810I2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim50Q810I2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trim50Q810I2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim50Q810I2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim50Q810I2 Gm13148-201ENSMUST00000118892 745 ntBASIC17.72■□□□□ 0.43
Trim50Q810I2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim50Q810I2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Trim50Q810I2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim50Q810I2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim50Q810I2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim50Q810I2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim50Q810I2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim50Q810I2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim50Q810I2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim50Q810I2 Gm12933-201ENSMUST00000120203 872 ntBASIC17.71■□□□□ 0.43
Trim50Q810I2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim50Q810I2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim50Q810I2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim50Q810I2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim50Q810I2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim50Q810I2 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.71■□□□□ 0.43
Trim50Q810I2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim50Q810I2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim50Q810I2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim50Q810I2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.7■□□□□ 0.42
Trim50Q810I2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.7■□□□□ 0.42
Trim50Q810I2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim50Q810I2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim50Q810I2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Trim50Q810I2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim50Q810I2 Mir5133-201ENSMUST00000174955 77 ntBASIC17.7■□□□□ 0.42
Trim50Q810I2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim50Q810I2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim50Q810I2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim50Q810I2 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.7■□□□□ 0.42
Trim50Q810I2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim50Q810I2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim50Q810I2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim50Q810I2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Trim50Q810I2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim50Q810I2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Trim50Q810I2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim50Q810I2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim50Q810I2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim50Q810I2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim50Q810I2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim50Q810I2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim50Q810I2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim50Q810I2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms